Source: ALL
Variant Gene N. diseases v DSI v DPI v Chr Position Consequence Alleles Class AF EXOME AF GENOME Score vda EI vda N. PMIDs First Ref. Last Ref.
dbSNP: rs2228570
rs2228570
VDR
99 0.521 0.760 12 47879112 start lost A/C;G;T snv 0.63 0.010 1.000 1 2019 2019
dbSNP: rs1041163
rs1041163
VCAM1
3 0.882 0.160 1 100718269 upstream gene variant T/C snv 0.18 0.010 1.000 1 2016 2016
dbSNP: rs1561198
rs1561198
VAMP5
3 0.882 0.120 2 85582866 upstream gene variant C/T snv 0.52 0.010 1.000 1 2018 2018
dbSNP: rs2277438
rs2277438
TNFSF11
5 0.827 0.160 13 42581032 intron variant G/A;C snv 0.010 1.000 1 2019 2019
dbSNP: rs3102735
rs3102735
TNFRSF11B ; COLEC10
12 0.752 0.400 8 118952831 upstream gene variant T/C snv 0.17 0.010 1.000 1 2019 2019
dbSNP: rs1800629
rs1800629
TNF
169 0.472 0.920 6 31575254 upstream gene variant G/A snv 0.12 0.14 0.010 1.000 1 2011 2011
dbSNP: rs3764879
rs3764879
TLR8 ; TLR8-AS1
6 0.807 0.320 X 12906578 intron variant C/G snv 0.30 0.010 1.000 1 2019 2019
dbSNP: rs3853839
rs3853839
TLR7
10 0.752 0.480 X 12889539 3 prime UTR variant C/G;T snv 0.010 1.000 1 2019 2019
dbSNP: rs4986790
rs4986790
TLR4
223 0.438 0.800 9 117713024 missense variant A/G;T snv 6.1E-02; 4.0E-06 0.090 0.778 9 2004 2019
dbSNP: rs4986791
rs4986791
TLR4
182 0.456 0.840 9 117713324 missense variant C/T snv 5.7E-02 4.9E-02 0.060 0.667 6 2004 2019
dbSNP: rs11536889
rs11536889
TLR4
27 0.658 0.560 9 117715853 3 prime UTR variant G/C snv 0.11 0.010 1.000 1 2012 2012
dbSNP: rs1927911
rs1927911
TLR4
28 0.658 0.640 9 117707776 intron variant A/G snv 0.62 0.010 1.000 1 2019 2019
dbSNP: rs2149356
rs2149356
TLR4
14 0.742 0.360 9 117711921 intron variant T/G snv 0.54 0.010 1.000 1 2019 2019
dbSNP: rs7873784
rs7873784
TLR4
11 0.752 0.440 9 117716658 3 prime UTR variant G/A;C;T snv 0.010 1.000 1 2019 2019
dbSNP: rs5743708
rs5743708
TLR2
98 0.525 0.800 4 153705165 missense variant G/A snv 1.7E-02 1.8E-02 0.020 0.500 2 2004 2010
dbSNP: rs5743611
rs5743611
TLR1
7 0.807 0.160 4 38798593 missense variant C/G snv 6.9E-02 7.1E-02 0.010 1.000 1 2019 2019
dbSNP: rs1800469
rs1800469
TGFB1 ; B9D2
78 0.547 0.760 19 41354391 intron variant A/G snv 0.69 0.010 1.000 1 2015 2015
dbSNP: rs1800470
rs1800470
TGFB1
107 0.515 0.840 19 41353016 missense variant G/A;C snv 0.55; 2.4E-04 0.010 1.000 1 2015 2015
dbSNP: rs1800471
rs1800471
TGFB1
48 0.597 0.840 19 41352971 missense variant C/G;T snv 5.6E-02 0.010 1.000 1 2015 2015
dbSNP: rs6885116
rs6885116
TENM2
2 0.925 0.040 5 168216540 intron variant A/G snv 0.14 0.700 1.000 1 2012 2012
dbSNP: rs953038635
rs953038635
SOD2
51 0.590 0.800 6 159692720 missense variant G/A;T snv 8.0E-06 0.010 1.000 1 2015 2015
dbSNP: rs11084095
rs11084095
SIGLEC5
2 0.925 0.040 19 51623777 intron variant G/A snv 0.30 0.700 1.000 1 2019 2019
dbSNP: rs4284742
rs4284742
SIGLEC5
2 0.925 0.040 19 51628480 intron variant A/G snv 0.78 0.010 1.000 1 2017 2017
dbSNP: rs729876
rs729876
SHISA9 ; LOC107984137
2 0.925 0.040 16 13294921 intron variant T/C snv 0.16 0.700 1.000 1 2019 2019
dbSNP: rs1131498
rs1131498
SELL ; C1orf112
13 0.732 0.360 1 169707345 missense variant A/G snv 0.21 0.22 0.010 1.000 1 2009 2009